Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biofilm-promoting protein bpfa | SO_4317 | Not Available | + | 4495162 - 4503468 | 285111.0 |
| type i protein secretion system bifunctional atpase and permease component aggc | SO_4318 | P26760 | + | 4503574 - 4505754 | 79242.9 |
| type i protein secretion system mfp component aggb | SO_4319 | Q03025 | + | 4505747 - 4507129 | 51155.8 |
| type i protein secretion system secretin component agga | SO_4320 | Q8G0Y6 | + | 4507156 - 4508571 | 52346.2 |
| pal-like t1ss-linked outer membrane lipoprotein | SO_4321 | P13794 | + | 4508568 - 4509173 | 22176.9 |
| t1ss associated periplasmic transglutaminase-like cysteine proteinase | SO_4322 | Not Available | + | 4509192 - 4509899 | 26763.4 |
| bifunctional diguanylate cyclase/phosphodiesterase lasd-like protein | SO_4323 | Q9I310 | + | 4509908 - 4511827 | 72878.5 |
| Trna-pro | Not Available | Not Available | + | 4512012 - 4512088 | Not Available |
| Trna-pro | Not Available | Not Available | + | 4512142 - 4512218 | Not Available |
| Trna-his | Not Available | Not Available | + | 4512234 - 4512309 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
