Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf484 | SO_4307 | P55886 | - | 4484569 - 4485204 | 24669.2 |
| diaminopimelate epimerase dapf | SO_4308 | Q8E9H5 | - | 4485201 - 4486028 | 30065.2 |
| diaminopimelate decarboxylase lysa | SO_4309 | Q9KVL7 | - | 4486099 - 4487343 | 45213.1 |
| putative lipoprotein | SO_4310 | Not Available | - | 4487386 - 4487580 | 6990.55 |
| iron donor for fes cluster assembly cyay | SO_4311 | Q8E9H2 | + | 4487648 - 4487977 | 12225.3 |
| adenylate cyclase cyaa | SO_4312 | Q59119 | - | 4488018 - 4490432 | 92449.6 |
| hydroxymethylbilane synthase hemc | SO_4313 | Q8E9H0 | + | 4490634 - 4491566 | 33465.6 |
| uroporphyrinogen-iii synthase hemd | SO_4314 | Q9L6Q3 | + | 4491571 - 4492311 | 26807.2 |
| uroporphyrin-iii c-methyltransferase hemx | SO_4315 | P09127 | + | 4492372 - 4493616 | 45888.4 |
| protoheme synthesis protein hemy | SO_4316 | P0ACB9 | + | 4493613 - 4494779 | 44117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
