Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na-dependent nicotinamide ribose transporter nupc | SO_4296 | P44742 | + | 4474449 - 4475654 | 41584.5 |
| n-ribosylnicotinamide phosphorylase nadp | SO_4297 | P0A1F7 | + | 4475725 - 4476450 | 25942.0 |
| transcriptional activator of nicotinamideribose utilization pnur | SO_4298 | Not Available | + | 4476764 - 4477438 | 25445.6 |
| chloramphenicol o-acetyltransferase catb | SO_4299 | P26838 | + | 4477624 - 4478256 | 23552.9 |
| issod1 transposase tnpa_issod1 | SO_4301 | P0CF79 | - | 4478982 - 4480141 | 44945.6 |
| repair of iron centers (ric) protein dnrn | SO_4302 | C6CAS5 | + | 4480851 - 4481597 | 27994.4 |
| atpase family protein associated with various cellular activities | SO_4303 | Not Available | + | 4481696 - 4482199 | 18978.9 |
| nickel uptake transporter hupe | SO_4304 | P27650 | - | 4482205 - 4482780 | 19992.6 |
| had-superfamily hydrolase subfamily ia variant 1 family protein | SO_4305 | P0ADP0 | - | 4482906 - 4483628 | 26844.4 |
| tyrosine recombinase xerc | SO_4306 | Q7ZAJ5 | - | 4483628 - 4484548 | 34941.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
