Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit leuc | SO_4234 | Q8E9N4 | - | 4411057 - 4412481 | 50423.5 |
| 3-isopropylmalate dehydrogenase leub | SO_4235 | Q8E9N3 | - | 4412481 - 4413575 | 39370.3 |
| 2-isopropylmalate synthase leua | SO_4236 | Q8E9N2 | - | 4413627 - 4415195 | 57010.8 |
| leuabcd operon attenuation leader peptide leul | SO_4810 | Not Available | - | 4415317 - 4415385 | 2513.2 |
| issod3 transposase tnpa_issod3 | SO_4239 | Not Available | - | 4416264 - 4417478 | 46838.5 |
| atp-dependent dna helicase recq | SO_4241 | P15043 | - | 4418799 - 4420622 | 68170.2 |
| 4-hydroxybenzoyl-coa thioesterase family protein yigi | SO_4242 | P0A1U1 | + | 4420874 - 4421338 | 16909.4 |
| 10 tms drug/metabolite exporter (dme) family protein rard | SO_4243 | Q9KVF1 | + | 4421555 - 4422439 | 32694.4 |
| uncharacterized protein | SO_4244 | Not Available | - | 4422483 - 4423001 | 19085.8 |
| amino-acid acetyltransferase arga | SO_4245 | P59292 | - | 4423106 - 4424443 | 48940.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
