Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease tatd | SO_4206 | D8MKW4 | + | 4371918 - 4372721 | 29780.6 |
| 7tm intracellular signalling protein with ggdef domain | SO_4207 | Q55434 | + | 4372714 - 4374591 | 70416.2 |
| delta-aminolevulinic acid dehydratase hemb | SO_4208 | Q59643 | + | 4374601 - 4375611 | 37146.9 |
| 5s ribosomal rna | Not Available | Not Available | + | 4376985 - 4377104 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 4377308 - 4380200 | Not Available |
| Trna-ala | Not Available | Not Available | + | 4380475 - 4380550 | Not Available |
| Trna-ile | Not Available | Not Available | + | 4380689 - 4380765 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 4380836 - 4382369 | Not Available |
| preprotein translocase atpase subunit seca | SO_4211 | Q8E9Q5 | - | 4383086 - 4385812 | 102629.0 |
| peptidase m23 family | SO_4212 | P45682 | - | 4385873 - 4386772 | 32806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
