Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridylate synthase family protein | SO_4181 | P72970 | - | 4354049 - 4354966 | 34868.2 |
| atp-dependent protease la (lon) domain protein | SO_4182 | Not Available | - | 4355019 - 4355594 | 21918.6 |
| issod1 transposase tnpa_issod1 | SO_4184 | P0CF79 | - | 4355624 - 4356783 | 44945.6 |
| uncharacterized protein | SO_4187 | Not Available | - | 4357426 - 4357893 | 17579.4 |
| protein of unknown function duf386 | SO_4189 | P45424 | + | 4358321 - 4358782 | 17298.5 |
| inorganic pyrophosphatase manganese-dependent ppac | SO_4190 | O29502 | + | 4358926 - 4359846 | 33451.6 |
| membrane protein of unknown function deda family | SO_4191 | Q55705 | + | 4360034 - 4360645 | 22583.6 |
| esterase/lipase/thioesterase family protein | SO_4193 | Not Available | - | 4360876 - 4362249 | 50498.2 |
| glycosyl transferase tigr00661 | SO_4194 | Not Available | - | 4362386 - 4363426 | 38941.7 |
| pap2 family protein | SO_4195 | Q58DI5 | - | 4363482 - 4363994 | 18585.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
