Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell-cell signaling protein c-factor | SO_4170 | Q9RBP5 | + | 4343413 - 4344123 | 26256.6 |
| uncharacterized protein | SO_4171 | Not Available | - | 4344168 - 4344644 | 18177.1 |
| oxygen-responsive two component signal transduction system controlling redox affected systems response regulator prra | SO_4172 | P0C5S3 | - | 4344676 - 4345227 | 20269.8 |
| oxygen-responsive two component signal transduction system controlling redox affected systems histidine kinase prrb | SO_4173 | P0C0Z0 | - | 4345224 - 4346507 | 46819.9 |
| dtdp-4-dehydrorhamnose reductase family | SO_4174 | Q566L8 | - | 4346510 - 4347430 | 32767.4 |
| metallophosphatase binding domain protein | SO_4176 | Not Available | + | 4347611 - 4349458 | 69811.9 |
| periplasmic protein of expolysaccharide biosynthesis cluster mxdd | SO_4177 | Not Available | - | 4349460 - 4349816 | 12955.4 |
| membrane anchored protein mxdc | SO_4178 | Not Available | - | 4349998 - 4351053 | 38544.0 |
| glycosyl transferase family 2 mxdb | SO_4179 | Q9RQP9 | - | 4351053 - 4352381 | 50353.8 |
| diguanylate cyclase-like protein mxda | SO_4180 | Not Available | - | 4352378 - 4353766 | 53165.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
