Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator lysr family | SO_4154 | P76250 | + | 4329034 - 4329945 | 34140.2 |
| thiosulfate/tetrathionate-responsive two component signal transduction system histidine kinase ttrs | SO_4155 | Q8ZPP6 | - | 4330024 - 4331829 | 67011.2 |
| thiosulfate/tetrathionate-responsive two component signal transduction system response regulator ttrr | SO_4157 | Q7CQM8 | + | 4332031 - 4332639 | 22604.6 |
| pild processed protein | SO_4159 | Not Available | + | 4333083 - 4333664 | 21135.6 |
| lysine-n-methylase fliuv | SO_4160 | Q9KJV4 | + | 4333909 - 4335087 | 44189.0 |
| hlsvu protease peptidase component hslv | SO_4162 | Q8E9V0 | + | 4335341 - 4335865 | 18918.8 |
| hlsvu protease atpase component hslu | SO_4163 | Q8E9U9 | + | 4335884 - 4337206 | 49802.9 |
| protein of unknown function duf971 | SO_4164 | Not Available | + | 4337352 - 4337738 | 14746.7 |
| issod4 transposase tnpa_issod4 | SO_4165 | P55620 | + | 4338426 - 4339628 | 45588.9 |
| deoxyribodipyrimidine photolyase-related protein | SO_4169 | A9CH39 | + | 4341822 - 4343387 | 60669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
