Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase udp | SO_4133 | P12758 | - | 4289818 - 4290576 | 26854.2 |
| protein of unknown function duf465 | SO_4134 | P0ACW6 | + | 4290989 - 4291201 | 8427.05 |
| issod7 transposase tnpa_issod7 | SO_4135 | P03835 | + | 4291321 - 4292643 | 50286.0 |
| ornithine decarboxylase spec | SO_4136 | O50657 | - | 4292691 - 4293866 | 43997.3 |
| putative periplasmic protein | SO_4138 | Not Available | - | 4294271 - 4294753 | 17434.3 |
| tpr repeat protein | SO_4139 | Not Available | + | 4294990 - 4296534 | 58424.1 |
| transcriptional regulator lysr family | SO_4140 | P52678 | - | 4296612 - 4297451 | 31262.0 |
| oxidoreductase short-chain dehydrogenase/reductase family | SO_4141 | Q49WS9 | + | 4297612 - 4298343 | 25625.9 |
| periplasmic monoheme cytochrome c | SO_4142 | Not Available | + | 4298868 - 4299197 | 12027.3 |
| outer membrane protein of unknown function duf3373 | SO_4143 | Not Available | + | 4299377 - 4301101 | 63454.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
