Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alternative ribosome-rescue factor arfa | SO_4073 | P36675 | - | 4228110 - 4228358 | 9182.27 |
| abc-type transport system substrate-binding component | SO_4075 | Not Available | + | 4228632 - 4229477 | 31902.3 |
| tonb-dependent receptor | SO_4077 | Q9JZN9 | + | 4229658 - 4231784 | 78226.3 |
| microcin-processing peptidase tlde | SO_4078 | P0AFK1 | - | 4231902 - 4233245 | 47983.8 |
| protein of unknown function duf615 | SO_4079 | Q8EA30 | + | 4233407 - 4233940 | 20628.7 |
| outer membrane lipoprotein intimin-like protein | SO_4080 | Not Available | + | 4233969 - 4236449 | 84804.2 |
| putrescine uptake protein puup | SO_4081 | P0AA48 | - | 4236504 - 4237835 | 48560.5 |
| putative microcin | SO_4082 | Not Available | - | 4237832 - 4237924 | 3007.84 |
| chitinase chia | SO_4085 | Q838S2 | + | 4238458 - 4240647 | 78778.0 |
| abc-type efflux system permease component 2 | SO_4087 | Not Available | - | 4240807 - 4241943 | 41693.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
