Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic peptidase family m16b | SO_4022 | P31828 | - | 4171878 - 4174709 | 104293.0 |
| issod4 transposase tnpa_issod4 | SO_4024 | P55620 | + | 4176045 - 4177247 | 45588.9 |
| single-strand binding protein ssb | SO_4028 | Q8EA81 | - | 4182430 - 4183146 | 25774.8 |
| drug:h+ antiporter dha1 family | SO_4029 | P77726 | - | 4183255 - 4184622 | 48665.8 |
| excinuclease abc a subunit uvra | SO_4030 | Q9KUW5 | + | 4185017 - 4187869 | 105084.0 |
| predicted transmembrane protein | SO_4031 | Not Available | + | 4187944 - 4188285 | 12075.8 |
| m28 family peptidase | SO_4032 | P10423 | + | 4188347 - 4189390 | 38735.4 |
| atp-dependent rna helicase dead | SO_4034 | P57453 | + | 4189587 - 4191458 | 69386.3 |
| predicted membrane protein | SO_4035 | Not Available | + | 4191645 - 4192004 | 13063.2 |
| uncharacterized protein | SO_4036 | Not Available | + | 4192146 - 4192676 | 20925.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
