Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orphan abc-type transport system substrate-binding component | SO_3967 | P57911 | - | 4107107 - 4107937 | 28960.1 |
| putative outer membrane lipoprotein yiad | SO_3969 | P37665 | - | 4108159 - 4108845 | 23319.8 |
| transposase domain protein | SO_3972 | Not Available | + | 4109515 - 4109748 | 8836.74 |
| ser/thr protein kinase | SO_3973 | D4GYY1 | - | 4110395 - 4111252 | 32117.2 |
| lipoprotein of unknown function duf2799 | SO_3974 | Not Available | + | 4111739 - 4112287 | 21171.0 |
| membrane protein pap2 superfamily | SO_3975 | Not Available | - | 4112310 - 4113074 | 28661.4 |
| ammonia-forming nitrite reductase nrfa | SO_3980 | Q8EAC7 | - | 4116214 - 4117617 | 52336.5 |
| nitrate/nitrite-responsive two component signal transduction system histidine kinase narq | SO_3981 | P27896 | + | 4117857 - 4119653 | 67418.1 |
| nitrate/nitrite-responsive two component signal transduction system response regulator narp | SO_3982 | P31802 | + | 4119646 - 4120275 | 23173.0 |
| protein of unknown function upf0231 | SO_3983 | Q8EAC4 | - | 4120365 - 4120739 | 14421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
