Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | SO_3957 | Q8ZB47 | + | 4099632 - 4100183 | 20208.2 |
| abc-type lipopolysaccharide export system mfp component lptc | SO_3958 | P0ADW1 | + | 4100180 - 4100740 | 21080.9 |
| abc-type lipopolysaccharide export system chaperone component lpta | SO_3959 | P0ADV3 | + | 4100727 - 4101278 | 19903.8 |
| abc-type lipopolysaccharide export system atpase component lptb | SO_3960 | P0A9V3 | + | 4101275 - 4102006 | 27009.7 |
| rna polymerase sigma-54 factor rpon | SO_3961 | Q9S0L2 | + | 4102113 - 4103588 | 55321.5 |
| sigma-54 modulation protein/ribosome-associated factor yhbh | SO_3962 | P17160 | + | 4103617 - 4103904 | 11043.3 |
| phosphotransferase system (pts) sugar-specific iia component ptsn | SO_3963 | P17162 | + | 4103907 - 4104350 | 16101.7 |
| glmz repressor yhbj | SO_3964 | Q8EAE2 | + | 4104347 - 4105201 | 32268.9 |
| phosphotransferase system (pts) phosphohisitinoprotein-hexose phosphotransferase comonent ptso | SO_3965 | Q9S0K8 | + | 4105188 - 4105463 | 9509.69 |
| magnesium transporter mgte family | SO_3966 | O34442 | + | 4105660 - 4107024 | 49455.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
