Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod4 transposase tnpa_issod4 | SO_3944 | P55620 | - | 4089796 - 4090998 | 45588.9 |
| issod14 transposase tnpa_issod14 | SO_3945 | Q9HI37 | - | 4091692 - 4092726 | 38638.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase mura | SO_3948 | Q8EAF7 | - | 4093450 - 4094709 | 44768.8 |
| transcriptional regulator bola family yrba | SO_3949 | P0A9W7 | - | 4094722 - 4094973 | 9349.22 |
| abc-type phospholipid uptake (salvage) system anti-anti-sigma factor mlab | SO_3950 | Not Available | - | 4094990 - 4095274 | 10537.6 |
| abc-type phospholipid uptake (salvage) system periplasmic chaperone mlac | SO_3951 | P0ADV7 | - | 4095280 - 4095933 | 24992.0 |
| abc-type phospholipid uptake (salvage) system substrate-binding component mlad | SO_3952 | P45029 | - | 4095945 - 4096418 | 16930.8 |
| abc-type phospholipid uptake (salvage) system permease component mlae | SO_3953 | P64608 | - | 4096475 - 4097260 | 28167.4 |
| abc-type phospholipid uptake (salvage) system atpase component mlaf | SO_3954 | P45031 | - | 4097257 - 4098075 | 29813.3 |
| arabinose-5-phosphate isomerase kdsd | SO_3956 | Q8D1Q8 | + | 4098655 - 4099632 | 34648.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
