Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine2251-2'-o)-methyltransferase rlmb | SO_3934 | Q8EAG8 | - | 4078791 - 4079531 | 26537.4 |
| 3'-5' exoribonuclease r rnr | SO_3935 | Q9KNY1 | - | 4079532 - 4081958 | 90913.0 |
| flagellar rotation associated protein motx | SO_3936 | P40608 | - | 4081999 - 4082655 | 24611.2 |
| adenylosuccinate synthetase pura | SO_3937 | Q8EAG5 | - | 4082763 - 4084058 | 46929.6 |
| inner membrane protein of unknown function duf2065 yjet | SO_3938 | P0AF74 | - | 4084125 - 4084313 | 6979.94 |
| 30s ribosomal protein s9 rpsi | SO_3939 | B8E9M8 | - | 4084427 - 4084819 | 14536.8 |
| 50s ribosomal protein l13 rplm | SO_3940 | Q8EAG2 | - | 4084834 - 4085262 | 15744.1 |
| afg1-like atpase | SO_3941 | P64613 | - | 4085559 - 4086671 | 42107.6 |
| periplasmic serine protease degq | SO_3942 | P39099 | + | 4087120 - 4088472 | 46553.2 |
| serine protease degs | SO_3943 | P0AEE4 | + | 4088598 - 4089680 | 38047.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
