Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna2fmet-dihydrouridine21 synthase dusa | SO_3912 | Q8EAJ0 | - | 4056915 - 4057922 | 37523.1 |
| fur regulated pkhd-type hydroxylase piuc | SO_3913 | Q8EAI9 | - | 4058153 - 4058827 | 25299.2 |
| tonb-dependent siderophore receptor | SO_3914 | P81549 | - | 4058903 - 4061095 | 79974.3 |
| chemotaxis signal transduction system chey dephosphorylase chex | SO_3915 | Not Available | + | 4061653 - 4062117 | 16513.2 |
| alanine racemase biosynthetic alr | SO_3916 | Q8EAI6 | - | 4062295 - 4063371 | 38943.9 |
| replicative dna helicase dnab | SO_3917 | P0A1Q5 | - | 4063448 - 4064854 | 52009.0 |
| periplasmic peptidase subfamily s1b | SO_3918 | A4Y3F4 | + | 4064980 - 4067178 | 82011.0 |
| periplasmic | SO_3920 | P07598 | + | 4067816 - 4069048 | 43899.4 |
| periplasmic | SO_3921 | P07603 | + | 4069061 - 4069381 | 12159.6 |
| formate dehydrogenase cytochrome b fdh | SO_3922 | P0AEK8 | + | 4069395 - 4070078 | 25505.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
