Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf3149 | SO_3891 | Not Available | + | 4037500 - 4037631 | 4868.24 |
| uncharacterized protein | SO_3892 | Not Available | - | 4037752 - 4038363 | 23024.8 |
| two component signal transduction system histidine kinase | SO_3894 | Q9HUI3 | + | 4038533 - 4040164 | 61005.1 |
| hesa/moeb/thif family protein | SO_3895 | Q46927 | - | 4040239 - 4041042 | 28716.6 |
| outer membrane porin omp35 | SO_3896 | P13415 | + | 4042065 - 4043174 | 39900.1 |
| dna topoisomerase iv a subunit parc | SO_3897 | Q9HUK1 | - | 4043373 - 4045649 | 84481.0 |
| putative quinoprotein dehydrogenase | SO_3898 | O51055 | - | 4045642 - 4046817 | 43404.3 |
| dna topoisomerase iv b subunit pare | SO_3899 | P20083 | - | 4046871 - 4048757 | 69793.2 |
| enzyme of unknown function upf0227 | SO_3900 | P0A8Z9 | - | 4048814 - 4049389 | 21929.0 |
| cyclic 3', 5'-adenosine monophosphate phosphodiesterase cpda | SO_3901 | P0AEW5 | - | 4049416 - 4050252 | 31091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
