Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod5 transposase tnpa_issod5 | SO_3878 | P80011 | + | 4025520 - 4026725 | 45377.7 |
| issod13 transposase tnpa_issod13 | SO_3880 | Q7DC27 | + | 4027310 - 4028350 | 39889.5 |
| issod4 transposase tnpa_issod4 | SO_3882 | P55620 | + | 4028771 - 4029973 | 45588.9 |
| site-specific recombinase phage integrase family | SO_3884 | Q9KCP0 | + | 4030647 - 4031579 | 34370.9 |
| aaa atpase family protein | SO_3885 | O28972 | + | 4031573 - 4033615 | 75521.6 |
| uncharacterized protein | SO_3886 | Not Available | + | 4033638 - 4034105 | 17538.4 |
| protein of unknown function duf2787 | SO_3887 | Not Available | + | 4034187 - 4034591 | 15398.2 |
| protein of unknown function duf1508 | SO_3888 | Q8EAL4 | + | 4034722 - 4035054 | 12019.1 |
| Trna-leu | Not Available | Not Available | + | 4035185 - 4035271 | Not Available |
| energy taxis-modulating methyl accepting sensory transducer with hemerythrin sensory domain | SO_3890 | Q9Z429 | - | 4035596 - 4037185 | 58455.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
