Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod12 transposase tnpa_issod12 | SO_3854 | P03009 | + | 3999533 - 4000456 | 35202.8 |
| nad-dependent malate dehydrogenase (oxaloacetate-decarboxylating) sfca | SO_3855 | Q8EAP2 | + | 4000798 - 4002486 | 62165.5 |
| protein of unknown function duf3069 | SO_3856 | Not Available | - | 4002560 - 4002994 | 16378.5 |
| phosphoesterase pa-phosphatase related protein | SO_3857 | B2RLI7 | - | 4003018 - 4003545 | 18924.4 |
| issod4 transposase tnpa_issod4 | SO_3858 | P55620 | - | 4003664 - 4004866 | 45588.9 |
| diguanylate cyclase | SO_3859 | A0A0H3AFM6 | + | 4005001 - 4006896 | 71466.3 |
| periplasmic substrate binding protein family 3 | SO_3860 | P0AEN0 | - | 4006898 - 4007695 | 29606.7 |
| 4fe-4s binding protein yjes | SO_3861 | Q8EAN7 | + | 4007857 - 4009038 | 43582.4 |
| transcriptional repressor of molybdate and molybdenium cofactor metabolism mode | SO_3862 | P58497 | - | 4009058 - 4009837 | 27626.6 |
| abc-type molybdate uptake system substrate-binding component moda | SO_3863 | P37329 | + | 4010040 - 4010825 | 28152.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
