Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor ecf subfamily | SO_3840 | H8F0N6 | + | 3989923 - 3990456 | 20286.6 |
| anti-sigma factor | SO_3841 | Not Available | + | 3990456 - 3991049 | 22069.2 |
| secreted low complexity protein | SO_3842 | Not Available | + | 3991046 - 3992002 | 34115.4 |
| 16s rrna pseudouridine516 synthase rsua | SO_3843 | P0AA45 | - | 3992075 - 3992764 | 25269.8 |
| thermoregulated outer membrane m13 family zinc endopeptidase pepo | SO_3844 | P97739 | + | 3993110 - 3995194 | 77210.2 |
| (p)ppgpp synthetase relv | SO_3846 | Not Available | + | 3995405 - 3996190 | 29307.8 |
| cell wall assembly/cell proliferation coordinating protein knr4-like protein | SO_3847 | Not Available | + | 3996395 - 3996802 | 15953.7 |
| cytoplasmic protein of unknown function | SO_3848 | Not Available | + | 3996848 - 3997348 | 18820.4 |
| membrane-anchored protein of unknown function duf304 | SO_3849 | Not Available | + | 3997701 - 3998243 | 19873.5 |
| protein of unknown function duf1456 | SO_3852 | P33355 | + | 3998721 - 3999191 | 17985.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
