Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type druge1 family export system atpase component | SO_3802 | P36879 | - | 3956840 - 3957778 | 34804.6 |
| hypoxanthine phosphoribosyltransferase hprt | SO_3803 | P18134 | - | 3958022 - 3958552 | 19942.3 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase ubix | SO_3804 | Q9KP38 | - | 3958560 - 3959219 | 23433.4 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase mpl | SO_3805 | P37773 | - | 3959221 - 3960618 | 50401.2 |
| sterol desaturase family protein | SO_3807 | Q5M8F9 | - | 3960930 - 3961793 | 33434.1 |
| protein of unknown function duf2804 | SO_3808 | Not Available | - | 3961848 - 3962879 | 39085.4 |
| outer membrane protein ompa-like protein | SO_3810 | Not Available | - | 3963122 - 3963685 | 20767.3 |
| family 16 outer membrane lipoprotein of unknown function | SO_3811 | P0ADA6 | + | 3963822 - 3964388 | 21121.4 |
| periplasmic peptidyl-prolyl cis-trans isomerase ppia | SO_3812 | P83221 | + | 3964422 - 3965009 | 21631.9 |
| uncharacterized protein | SO_3813 | Not Available | + | 3965076 - 3965396 | 12445.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
