Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | SO_3744 | Not Available | - | 3889204 - 3890031 | 31512.5 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase rfae | SO_3745 | Q8EAZ2 | - | 3890028 - 3891458 | 50487.8 |
| lipid a biosynthesis lauroyl acyltransferase lpxl | SO_3746 | P45239 | + | 3891561 - 3892487 | 35424.0 |
| k+:h+ antiporter khap | SO_3747 | Q8EAZ0 | - | 3892721 - 3894445 | 61346.9 |
| ld-transpeptidase ybis | SO_3748 | P0AAY0 | + | 3895217 - 3896131 | 33565.9 |
| n-acetyl-l-ornithine deacetylase arge | SO_3749 | Not Available | - | 3896224 - 3897051 | 30281.8 |
| predicted non-catalytic member of peptidase subfamily m16b | SO_3750 | P55679 | + | 3897243 - 3898658 | 52737.1 |
| issod4 transposase tnpa_issod4 | SO_3752 | P55620 | - | 3899914 - 3901116 | 45558.8 |
| afg1-family atpase | SO_3756 | P64613 | + | 3902979 - 3904064 | 40291.5 |
| transcriptional regulator of bicarbonate utilization lysr family | SO_3757 | Q55459 | - | 3904203 - 3905195 | 36871.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
