Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic rmlc-type cupin domain family protein | SO_3622 | O67787 | - | 3782474 - 3783217 | 27620.8 |
| flavocytochrome c heme submit | SO_3623 | Not Available | - | 3783270 - 3783620 | 13136.5 |
| issod3 transposase tnpa_issod3 | SO_3625 | Not Available | + | 3785191 - 3786405 | 46838.5 |
| transcriptional repressor of flavocytochrome c tetr family | SO_3627 | P9WMD4 | + | 3786671 - 3787456 | 30296.8 |
| n-terminal bluf domain containing protein | SO_3629 | Q76L33 | + | 3788266 - 3788688 | 16045.5 |
| predicted lipoprotein | SO_3630 | Not Available | - | 3788961 - 3789329 | 13521.4 |
| nadh-dependent hydroxypyruvate reductase hpra | SO_3631 | C0CMQ8 | - | 3789347 - 3790303 | 34041.1 |
| predicted outer membrane protein | SO_3632 | Not Available | - | 3790356 - 3791000 | 23500.8 |
| dnak co-chaperone djla | SO_3633 | Q8EB99 | - | 3791056 - 3791844 | 29645.7 |
| nucleotidyltransferase family protein | SO_3634 | Q88QT2 | - | 3791939 - 3792619 | 24258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
