Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod4 transposase tnpa_issod4 | SO_3604 | P55620 | + | 3766395 - 3767597 | 45487.8 |
| issod1 transposase tnpa_issod1 | SO_3607 | P0CF79 | - | 3767751 - 3768910 | 44945.6 |
| issod1 transposase tnpa_issod1 | SO_3609 | P0CF79 | + | 3770277 - 3771436 | 44945.6 |
| aaa atpase family protein | SO_3611 | O78439 | - | 3772231 - 3773718 | 55348.2 |
| phosphoribosylglycinamide formyltransferase 2 purt | SO_3613 | Q8EBB7 | + | 3774218 - 3775393 | 42144.9 |
| protein of unknown function duf3142 | SO_3614 | Not Available | + | 3775627 - 3777162 | 56796.2 |
| tpr repeat-containing protein | SO_3615 | Not Available | + | 3777152 - 3779434 | 85192.7 |
| uncharacterized protein | SO_3617 | Not Available | + | 3780375 - 3780650 | 10811.5 |
| uncharacterized protein | SO_3618 | Not Available | + | 3780748 - 3781347 | 22552.2 |
| periplasmic protein of unknown function duf3299 | SO_3621 | Not Available | - | 3781960 - 3782421 | 16718.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
