Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted non-catalytic member of peptidase subfamily m16b | SO_3560 | P55679 | - | 3718888 - 3721737 | 104614.0 |
| membrane protein | SO_3561 | P0ADR0 | - | 3721879 - 3722304 | 15109.2 |
| proton/sodium:glutamate symporter daacs family | SO_3562 | O59010 | + | 3722592 - 3723833 | 43554.9 |
| 2og-fe(ii) oxygenase family protein | SO_3563 | Q86KR9 | - | 3723901 - 3724524 | 23833.5 |
| dipeptidyl carboxypeptidase dcp | SO_3564 | P24171 | - | 3724745 - 3726895 | 78727.0 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3`-nucleotidase cpdb | SO_3565 | P26265 | + | 3727579 - 3729636 | 74932.5 |
| issod3 transposase tnpa_issod3 | SO_3567 | Not Available | - | 3730776 - 3731990 | 46838.5 |
| issod1 transposase tnpa_issod1 | SO_3569 | P0CF79 | + | 3732349 - 3733508 | 44945.6 |
| periplasmic protein of unknown function duf2057 | SO_3571 | B8CNM2 | + | 3733676 - 3734314 | 23619.2 |
| 5s ribosomal rna | Not Available | Not Available | + | 3734855 - 3734974 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
