Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf328 | SO_3540 | Q8EBH6 | - | 3693725 - 3694498 | 28800.5 |
| alanine/glycine:cation symporter (agcs) family protein | SO_3541 | P30143 | - | 3694605 - 3696071 | 52083.4 |
| d-xylulose 5-phosphate/d-fructose 6-phosphate phosphoketolase xfp | SO_3542 | Q89S87 | + | 3696506 - 3698872 | 89181.4 |
| issod13 transposase tnpa_issod13 | SO_3543 | Q7DC27 | + | 3698990 - 3700030 | 39889.5 |
| issod7 transposase tnpa_issod7 | SO_3544 | P03835 | - | 3700146 - 3701468 | 50228.9 |
| outer membrane porin | SO_3545 | P22263 | + | 3701769 - 3702866 | 39566.9 |
| transaldolase b talb | SO_3546 | Q8EBH2 | + | 3703111 - 3704067 | 35023.9 |
| glucose-6-phosphate isomerase pgi | SO_3547 | Q8EBH1 | + | 3704088 - 3705725 | 59665.5 |
| protein of unknown function duf3545 | SO_3548 | Not Available | + | 3705941 - 3706126 | 7392.7 |
| hemerythrin | SO_3549 | Not Available | - | 3706208 - 3706744 | 20772.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
