Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pilin modification protein pilv | SO_3528 | Not Available | - | 3683136 - 3683699 | 20289.2 |
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate reductase isph | SO_3529 | Q8EBI7 | - | 3683917 - 3684873 | 34720.3 |
| peptidyl-prolyl cis-trans isomerase fkpb | SO_3530 | P0AEM2 | - | 3684875 - 3685294 | 14668.4 |
| signal peptidase ii lspa | SO_3531 | Q8EBI5 | - | 3685294 - 3685806 | 19530.5 |
| isoleucyl-trna synthetase iles | SO_3532 | Q8EBI4 | - | 3685816 - 3688638 | 105798.0 |
| bifunctional flavokinase/fad synthetase ribf | SO_3533 | P0AG42 | - | 3688671 - 3689606 | 34510.6 |
| peptidoglycan lipid ii flippase murj | SO_3534 | O34238 | - | 3689672 - 3691231 | 56689.3 |
| 30s ribosomal protein s20 rpst | SO_3537 | Q8EBH9 | + | 3691484 - 3691750 | 9758.08 |
| transcriptional activator hlyu | SO_3538 | P52695 | - | 3691811 - 3692107 | 11406.0 |
| peptidase m28d family | SO_3539 | Q9Y646 | + | 3692243 - 3693649 | 49714.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
