Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod4 transposase tnpa_issod4 | SO_3518 | P55620 | + | 3672867 - 3674069 | 45588.9 |
| regulatory protein for nitrogen assimilation by glutamine synthetase glnb | SO_3519 | Q9CJK1 | - | 3674143 - 3674481 | 12576.3 |
| type iv minor pilin protein fimt | SO_3520 | Not Available | + | 3674727 - 3675239 | 18799.3 |
| type iv pilus biogenesis protein fimu | SO_3521 | Not Available | + | 3675525 - 3676019 | 17376.6 |
| issod4 transposase tnpa_issod4 | SO_3522 | P55620 | + | 3676175 - 3677377 | 45588.9 |
| type iv pilin system protein | SO_3523 | Not Available | - | 3677476 - 3677781 | 11389.8 |
| type iv minor pilin protein pile | SO_3524 | G3XD43 | - | 3677778 - 3678170 | 14100.9 |
| type iv pili system adhesin pily | SO_3525 | Q02GC2 | - | 3678181 - 3681687 | 125597.0 |
| type iv minor pilin protein pilx | SO_3526 | Not Available | - | 3681691 - 3682152 | 15836.2 |
| type iv minor pilin protein pilw | SO_3527 | Not Available | - | 3682164 - 3683123 | 35560.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
