Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine locus membrane protein of unknown function duf1624 nagx | SO_3504 | Q3UDW8 | - | 3655214 - 3656401 | 43442.9 |
| n-acetylglucosamine-6-phosphate deacetylase naga | SO_3505 | A0KYQ5 | - | 3656540 - 3657676 | 39779.2 |
| glucosamine-6-phosphate deaminase nagb | SO_3506 | Q8TZ14 | - | 3657721 - 3658719 | 35204.6 |
| n-acetylglucosamine kinase nagk | SO_3507 | Q9KUA9 | - | 3658786 - 3659688 | 30977.1 |
| beta-n-acetylhexosaminidase hexb | SO_3509 | P49007 | - | 3659912 - 3662602 | 99382.4 |
| sapc family protein | SO_3512 | Not Available | - | 3664758 - 3665447 | 25854.1 |
| flavin-dependent tryptophan halogenase | SO_3513 | Q8KHZ8 | - | 3665483 - 3667006 | 56948.2 |
| tonb-dependent chitooligosaccharide receptor | SO_3514 | P05825 | - | 3667103 - 3669727 | 95016.5 |
| transcriptional repressor of n-acetylglucosamine utilization nagr | SO_3516 | Q65TP0 | + | 3670153 - 3671169 | 37014.3 |
| respiratory nadh dehydrogenase ii ndh | SO_3517 | P00393 | - | 3671369 - 3672658 | 47320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
