Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod6 transposase tnpa_issod6 | SO_3478 | P50358 | + | 3624622 - 3625380 | 29247.3 |
| cold-active protein-tyrosine phosphatase | SO_3480 | O74480 | + | 3627608 - 3628762 | 43823.2 |
| periplasmic substrate binding protein family 3 | SO_3481 | Not Available | + | 3628938 - 3629732 | 29203.2 |
| hae1 family efflux pump mfp component | SO_3483 | Q57500 | + | 3629932 - 3631041 | 39822.3 |
| hae1 family efflux pump permease component | SO_3484 | Q57124 | + | 3631041 - 3634181 | 113945.0 |
| multidrug efflux pump emrd3 | SO_3485 | Q1RI77 | - | 3634284 - 3635432 | 40671.2 |
| transcriptional regulator arac family | SO_3488 | P76241 | + | 3635856 - 3636623 | 28798.5 |
| diguanylate cyclase | SO_3489 | Q9HT84 | - | 3636803 - 3637741 | 35326.3 |
| protein of unknown function duf88 | SO_3490 | Q31LZ8 | + | 3638078 - 3638551 | 17638.2 |
| cyclic di-gmp hydrolase | SO_3491 | Q9KLR1 | - | 3638564 - 3639832 | 48100.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
