Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 34-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii ribba | SO_3467 | P51962 | - | 3612346 - 3613449 | 40198.4 |
| riboflavin synthase alpha subunit ribc-like protein | SO_3468 | P51961 | - | 3613516 - 3614172 | 23484.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase ribd | SO_3469 | P25539 | - | 3614180 - 3615325 | 41259.3 |
| transcriptional repressor of deoxyribonucleotide biosynthesis nrdr | SO_3470 | Q8EBN9 | - | 3615399 - 3615848 | 17102.7 |
| serine hydroxymethyltransferase glya | SO_3471 | Q8EBN8 | - | 3616039 - 3617292 | 45285.2 |
| reg family atpase yjjk | SO_3472 | P45127 | + | 3617483 - 3619150 | 62178.9 |
| transcriptional regulator lysr family | SO_3473 | P67664 | - | 3619277 - 3620200 | 34316.6 |
| metallo-beta-lactamase family protein | SO_3474 | Not Available | + | 3620399 - 3621298 | 32934.7 |
| disulfide bond formation facilitator | SO_3475 | Not Available | + | 3621410 - 3622075 | 24222.8 |
| periplasmic pilin biogenesis protein | SO_3476 | Not Available | - | 3622203 - 3622538 | 12843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
