Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod3 transposase tnpa_issod3 | SO_1541 | Not Available | - | 1617438 - 1618652 | 46838.5 |
| uncharacterized protein | SO_1543 | Not Available | - | 1618970 - 1619758 | 30598.7 |
| protein of unknown function duf1568 | SO_1546 | Not Available | - | 1620396 - 1621376 | 37894.9 |
| protein of unknown function duf1568 | SO_1547 | Not Available | - | 1621805 - 1622782 | 37407.4 |
| protein of unknown function duf3192 | SO_1548 | Not Available | - | 1623352 - 1623780 | 15965.7 |
| exodeoxyribonuclease iii associated protein xni | SO_1549 | Q8EGP9 | - | 1623888 - 1624673 | 29007.0 |
| putative lysine decarboxylase with duf3412 domain | SO_1550 | P0ADS0 | - | 1624688 - 1626043 | 50242.0 |
| diguanylate cyclase | SO_1551 | Q9HT84 | - | 1626100 - 1627656 | 59871.8 |
| tpr domain protein | SO_1552 | Not Available | - | 1627806 - 1629968 | 81778.6 |
| putative exonuclease rdgc | SO_1556 | Q8EGP3 | - | 1632127 - 1633041 | 33651.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
