Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase complex protein lldg | SO_1518 | Q5WJD9 | - | 1591201 - 1591770 | 20072.3 |
| l-lactate dehydrogenase iron-sulfur cluster-binding protein lldf | SO_1519 | B7GLD5 | - | 1591772 - 1593166 | 51435.3 |
| l-lactate dehydrogenase complex protein llde | SO_1520 | Q8ET92 | - | 1593177 - 1593920 | 26631.5 |
| respiratory fad-dependent d-lactate dehydrogenase dld | SO_1521 | P94535 | - | 1594222 - 1597026 | 102169.0 |
| lactate transport protein lctp family | SO_1522 | Q57251 | - | 1597093 - 1598736 | 57354.0 |
| nad kinase nadf | SO_1523 | Q8EGS1 | - | 1599470 - 1600348 | 32020.8 |
| heat shock nucleotide exchange factor grpe | SO_1524 | Q8EGS0 | + | 1600448 - 1601068 | 22703.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase dxs | SO_1525 | Q8EGR9 | - | 1601186 - 1603054 | 68087.5 |
| geranyl-diphosphate synthase/farnesyl-diphosphate synthase ispa | SO_1526 | P45204 | - | 1603076 - 1603957 | 31705.3 |
| exodeoxyribonuclease vii small subunit xseb | SO_1527 | C4LAC2 | - | 1603951 - 1604199 | 9100.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
