Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme glgb | SO_1494 | Q8EGU7 | + | 1560277 - 1562514 | 85192.8 |
| glycogen isoamylase glgx | SO_1495 | P0A4Y5 | + | 1562511 - 1564763 | 84196.0 |
| glycogen phosphorylase glgp | SO_1496 | P79334 | + | 1564766 - 1567279 | 94293.5 |
| glucose-1-phosphate adenylyltransferase glgc | SO_1498 | Q8EGU3 | + | 1567399 - 1568661 | 47286.7 |
| glycogen synthase adp-glucose transglucosylase glga | SO_1499 | Q2JRJ4 | + | 1568714 - 1570318 | 58936.7 |
| bifunctional diguanylate cyclase with pas sensory domains/diguanylate phosphodiesterase | SO_1500 | Q9I310 | + | 1570428 - 1573451 | 114372.0 |
| atp-dependent rna helicase dead box family | SO_1501 | P25888 | + | 1573654 - 1575024 | 49832.4 |
| gtpase involved in metallocenter biosynthesis of metalloproteins cog0523 family | SO_1502 | P33030 | + | 1575196 - 1576293 | 40330.5 |
| periplasmic substrate binding protein family 3 | SO_1503 | Not Available | - | 1576307 - 1577083 | 29269.2 |
| membrane protein of unknown function duf3087 | SO_1504 | Not Available | + | 1577428 - 1577949 | 19450.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
