Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | SO_1470 | Not Available | + | 1535896 - 1536510 | 23041.7 |
| cp4-57-like prophage integrase inta | SO_1471 | P32053 | - | 1536629 - 1537876 | 46999.9 |
| Tmrna,resume consensus sequence (at 84): tatagttgcaaacgacga | Not Available | Not Available | + | 1538145 - 1538499 | Not Available |
| ssra-binding protein smpb | SO_1473 | Q8EGW8 | - | 1538572 - 1539063 | 18702.1 |
| lipid binding/transport family protein yfjg | SO_1474 | Q8FEY4 | + | 1539328 - 1539765 | 16390.8 |
| upf0125 family protein yfjf | SO_1475 | Q8EGW6 | + | 1539755 - 1540090 | 12364.0 |
| beta barrel protein translocation component bame | SO_1476 | Q8EGW5 | - | 1540182 - 1540673 | 18645.3 |
| tp-methylase family protein | SO_1478 | Not Available | + | 1541111 - 1541902 | 29042.1 |
| uncharacterized protein | SO_1479 | Not Available | + | 1541947 - 1542162 | 7817.09 |
| diguanylate cyclase | SO_1480 | Q8EGF8 | + | 1542163 - 1543953 | 66672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
