Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii restriction-modification system methyltransferase | SO_1457 | Q89Z59 | + | 1514245 - 1516299 | 78434.6 |
| p-loop atpase superfamily protein | SO_1458 | Not Available | + | 1516296 - 1517591 | 48342.7 |
| concanavalin a-like lectin/glucanase domain protein | SO_1459 | Not Available | + | 1517594 - 1518256 | 25528.4 |
| type i restriction-modification system restriction endonuclease dna specificity subunit hsds | SO_1460 | Not Available | + | 1518253 - 1519662 | 52114.8 |
| serine/threonine protein kinase | SO_1461 | Q97IC2 | + | 1519672 - 1523802 | 155369.0 |
| cytoplasmic protein in type i restriction-modifcation system locus | SO_1462 | Not Available | + | 1523799 - 1525445 | 61937.1 |
| issod1 transposase tnpa_issod1 | SO_1464 | P0CF79 | + | 1530017 - 1531176 | 44945.6 |
| adp-ribose binding domain-containing protein | SO_1468 | P0DV57 | + | 1533026 - 1534087 | 39581.8 |
| transcriptional regulator cro/ci family | SO_1469 | Not Available | - | 1534142 - 1534396 | 9697.6 |
| predicted membrane protein | SO_4773 | Not Available | + | 1534619 - 1534951 | 12433.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
