Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted fmn-binding domain-containing lipoprotein | SO_1419 | Not Available | + | 1477072 - 1478424 | 50226.8 |
| metal-induced outer membrane porin ifco family | SO_1420 | P30689 | + | 1478442 - 1479479 | 38806.0 |
| periplasmic tetraheme flavocytochrome ifca | SO_1421 | Q9Z4P0 | - | 1479605 - 1481374 | 63028.4 |
| fe(iii)-induced transcriptional regulator ifcr | SO_1422 | P0A9F8 | + | 1481492 - 1482445 | 36650.3 |
| predicted outer membrane lipoprotein | SO_1424 | Not Available | + | 1482708 - 1484945 | 83624.9 |
| outer membrane morn variant repeat-containing protein | SO_1425 | Not Available | + | 1484956 - 1486698 | 66630.0 |
| periplasmic decaheme cytochrome c dmse | SO_1427 | P0DSN3 | + | 1488212 - 1489168 | 34658.9 |
| extracellular dimethyl sulfoxide/manganese oxide reductase outer membrane translocase dmsf | SO_1428 | P0DSN2 | + | 1489183 - 1491171 | 74501.3 |
| extracellular dimethyl sulfoxide/manganese oxide reductase molybdopterin-binding subunit dmsa | SO_1429 | P18775 | + | 1491191 - 1493701 | 91123.5 |
| extracellular dimethyl sulfoxide/manganese oxide reductase ferredoxin subunit dmsb | SO_1430 | P45003 | + | 1493715 - 1494389 | 24403.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
