Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter cpa1 family | SO_1366 | G3XD29 | + | 1421557 - 1422861 | 47161.5 |
| multifunctional chorismate mutase p/prephenate dehydratase/dahp synthetase phea | SO_1367 | P0A9J9 | - | 1422956 - 1424971 | 74094.1 |
| phea operon attenuation leader peptide phel | SO_4772 | Not Available | - | 1425076 - 1425129 | 2023.51 |
| cytoplasmic leucine metal-dependent aminopeptidase pepa | SO_1368 | Q8EH62 | - | 1425342 - 1426850 | 54726.0 |
| abc-type lipopolysaccharide export system permease component 1 lptf | SO_1369 | P45333 | + | 1427106 - 1428218 | 41177.4 |
| abc-type lipopolysaccharide export system permease component 2 lptg | SO_1370 | P0ADC7 | + | 1428215 - 1429273 | 38874.4 |
| rdd family protein | SO_1371 | Not Available | - | 1429347 - 1429856 | 18858.1 |
| protein of unknown function duf2960 | SO_1372 | Not Available | - | 1429896 - 1430153 | 9797.57 |
| inner membrane protein of unknown function duf486 | SO_1373 | Not Available | - | 1430180 - 1430530 | 13267.6 |
| acteyltransferase gnat family | SO_1374 | Q58925 | - | 1430530 - 1431024 | 18515.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
