Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein ffh | SO_1356 | P0AGD9 | + | 1411847 - 1413220 | 49915.6 |
| 30s ribosomal protein s16 rpsp | SO_1357 | Q8EH72 | + | 1413439 - 1413687 | 9109.01 |
| 16s rrna processing protein rimm | SO_1358 | Q8EH71 | + | 1413708 - 1414238 | 19885.9 |
| trna (guanine-n1)-methyltransferase trmd | SO_1359 | Q8CX44 | + | 1414254 - 1415000 | 27452.9 |
| 50s ribosomal protein l19 rpls | SO_1360 | B8EBP0 | + | 1415035 - 1415388 | 13293.2 |
| phospho-2-dehydro-3-deoxyheptonate aldolase tyr-sensitive arof | SO_1361 | P00888 | + | 1415685 - 1416776 | 39876.6 |
| bifunctional chorismate mutase t/prephenate dehydrogenase tyra | SO_1362 | Q8EH68 | + | 1416839 - 1417978 | 42878.2 |
| hydroxylamine reductase hcp | SO_1363 | Q8EH67 | + | 1418195 - 1419859 | 60505.0 |
| nadh oxidoreductase hcr | SO_1364 | P75824 | + | 1419941 - 1421053 | 40821.0 |
| predicted membrane protein | SO_1365 | Not Available | + | 1421176 - 1421511 | 12713.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
