Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 lepa | SO_1346 | Q8EH83 | + | 1402041 - 1403831 | 65975.8 |
| signal peptidase i lepb | SO_1347 | P0A1W3 | + | 1404010 - 1404927 | 34475.9 |
| ribonuclease iii rnc | SO_1348 | Q8EH81 | + | 1404929 - 1405609 | 25298.5 |
| 30s ribosome assembly gtpase era | SO_1349 | Q0I4Z4 | + | 1405606 - 1406625 | 38102.0 |
| dna repair protein reco | SO_1350 | Q15PH6 | + | 1406680 - 1407381 | 26042.9 |
| pyridoxal phosphate synthase pdxj | SO_1351 | Q8EH78 | + | 1407466 - 1408203 | 26561.1 |
| holo-(acyl-carrier protein) synthase acps | SO_1352 | Q8EH77 | + | 1408203 - 1408586 | 13639.3 |
| inner membrane protein of unknown function duf962 | SO_1353 | P25338 | + | 1408757 - 1409284 | 19676.7 |
| putative transporter hlyc/corc (hcc) family | SO_1354 | P37908 | - | 1409352 - 1410623 | 47024.4 |
| cytochrome c assembly family protein | SO_1355 | P64434 | - | 1410725 - 1411513 | 29019.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
