Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| family m23 zinc metallopeptidase with oapa domain | SO_1314 | P0AFT0 | - | 1369679 - 1371076 | 51797.4 |
| tyrosyl-trna synthetase tyrs | SO_1315 | Q8EHB3 | + | 1371202 - 1372398 | 44030.4 |
| predicted periplasmic protein | SO_1317 | Not Available | - | 1372837 - 1373265 | 15917.9 |
| ntf2-like superfamily protein | SO_1318 | Not Available | - | 1373389 - 1373880 | 18689.6 |
| homotrimeric cation channel (tric) family protein yads | SO_1319 | Q9R9S0 | - | 1373882 - 1374508 | 22149.1 |
| membrane protein of unknown function duf2721 | SO_1320 | Not Available | - | 1374505 - 1374882 | 13929.7 |
| adenosylcobinamide-phosphate synthase cobd | SO_1321 | Q7NXQ1 | - | 1374938 - 1375927 | 36718.5 |
| 5-methylthioadenosine nucleosidase/s-adenosylhomocysteine nucleosidase mtnn | SO_1322 | Q8EHA7 | - | 1375959 - 1376669 | 24884.1 |
| nadph-dependent glutamate synthase small subunit gltd | SO_1324 | E1V8I0 | - | 1376937 - 1378343 | 50789.8 |
| nadph-dependent glutamate synthase large subunit gltb | SO_1325 | P09831 | - | 1378350 - 1382798 | 163021.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
