Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| issod4 transposase tnpa_issod4 | SO_1269 | P55620 | + | 1316596 - 1317798 | 45588.9 |
| abc-type putrescine uptake system substrate-binding component potf | SO_1270 | Q9I6J0 | + | 1318406 - 1319509 | 40747.8 |
| abc-type putrescine uptake system atpase component potg | SO_1271 | P31134 | + | 1319669 - 1320805 | 42587.4 |
| abc-type putrescine uptake system permease component 1 poth | SO_1272 | P31135 | + | 1320802 - 1321707 | 33942.7 |
| abc-type putrescine uptake system permease component 2 poti | SO_1273 | P0AFL2 | + | 1321704 - 1322519 | 30158.8 |
| gamma-glutamylputrescine oxidoreductase puub | SO_1274 | P37906 | + | 1322756 - 1324042 | 46389.8 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase puuc | SO_1275 | Q88RC0 | + | 1324099 - 1325547 | 51275.0 |
| gaba aminotransferase plp-dependent puue | SO_1276 | P22256 | + | 1325611 - 1326888 | 44791.1 |
| proton:oligopeptide symporter pot family | SO_1277 | B6VMU9 | - | 1326974 - 1328524 | 56322.8 |
| chemotaxis signal transduction system methyl accepting sensory transducer | SO_1278 | Q88NI1 | + | 1328994 - 1331114 | 76429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
