Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase, ybgc/ybaw family | SO_1256 | P44679 | - | 1305846 - 1306259 | 16163.4 |
| adenylosuccinate synthetase | SO_1258 | Q3IIQ6 | - | 1306435 - 1307691 | 45627.7 |
| transcriptional regulator lysr family | SO_1259 | Q8X4M5 | + | 1307827 - 1308732 | 33797.0 |
| extracellular solute-binding protein family 3 | SO_1260 | P02911 | - | 1308755 - 1309576 | 30890.3 |
| mercaptopyruvate sulfurtransferase ssea | SO_1261 | P58388 | + | 1310078 - 1310935 | 31563.7 |
| protein of unknown function duf2937 | SO_1262 | Not Available | + | 1311029 - 1311541 | 19692.9 |
| fad-dependent oxidoreductase | SO_1264 | P37906 | - | 1311889 - 1313196 | 47689.7 |
| putrescine degradation gene regulator puur | SO_1265 | P0A9U6 | + | 1313431 - 1313979 | 20159.0 |
| gamma-glutamyl-aminobutyrate hydrolase puud | SO_1267 | Q8X7G2 | + | 1314365 - 1315126 | 27253.6 |
| gamma-glutamyl-putrescine synthase puua | SO_1268 | P78061 | + | 1315128 - 1316483 | 50478.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
