Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| purine nucleoside phosphorylase deod | SO_1221 | Q8EHK0 | + | 1267399 - 1268109 | 25604.1 |
| smp-2 superfamily membrane protein | SO_1222 | Q8Z0T9 | - | 1268277 - 1269500 | 45218.7 |
| phosphoserine phosphatase serb | SO_1223 | P0AGB1 | + | 1269580 - 1270572 | 35983.9 |
| esterase/lipase/thioesterase family protein | SO_1224 | Not Available | + | 1270674 - 1271660 | 36837.2 |
| c-di-gmp-binding protein | SO_1225 | Not Available | - | 1271673 - 1274051 | 90571.2 |
| atp-dependent protease rada | SO_1226 | P24517 | + | 1274210 - 1275574 | 48671.0 |
| c-di-gmp-binding protein | SO_1227 | Q9HVI1 | - | 1275657 - 1276049 | 14705.5 |
| tmao-responsive two component signal transduction system response regulator torr | SO_1228 | P38684 | + | 1276229 - 1276939 | 27348.0 |
| periplasmic component of the torrs tmao sensory system tort | SO_1229 | P38683 | - | 1276936 - 1278015 | 39554.8 |
| tmao-responsive two component signal transduction system hybrid histidine kinase/response regulator tors | SO_1230 | P58356 | + | 1278075 - 1281152 | 111297.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
