Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | SO_1191 | P64282 | + | 1234415 - 1234891 | 17434.9 |
| predicted extracytoplasmic protein | SO_1192 | Not Available | + | 1235121 - 1235696 | 21149.8 |
| preprotein translocase subunit secd | SO_1193 | E9RGS3 | + | 1235992 - 1237848 | 67271.8 |
| preprotein translocase subunit secf | SO_1194 | E9RGS4 | + | 1237851 - 1238735 | 31781.0 |
| putative rna-binding protein yhby | SO_1195 | P0AGK6 | - | 1238792 - 1239091 | 10857.5 |
| 23s rrna (uridine2552-2'-o)-methyltransferase rrmj | SO_1196 | Q8EHM3 | + | 1239182 - 1239811 | 23136.1 |
| atp-dependent zinc metalloprotease ftsh | SO_1197 | P63344 | + | 1239856 - 1241814 | 71565.0 |
| dihydropteroate synthase folp | SO_1198 | P0AC14 | + | 1241974 - 1242807 | 29950.3 |
| phosphoglucosamine mutase glmm | SO_1199 | Q8EHM0 | + | 1242881 - 1244218 | 47586.6 |
| triosephosphate isomerasetpia | SO_1200 | Q8EHL9 | + | 1244412 - 1245194 | 28074.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
