Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrdb | SO_1167 | P0ABG8 | - | 1209603 - 1210706 | 40692.2 |
| penicillin-binding protein 2 mrda | SO_1168 | P0AD67 | - | 1210703 - 1212559 | 70001.6 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase rlmh | SO_1169 | Q8EHP8 | - | 1212623 - 1213093 | 17515.3 |
| iojap-like ribosome-associated protein | SO_1170 | P0AAT7 | - | 1213093 - 1213422 | 12177.6 |
| nicotinate-nucleotide adenylyltransferase nadd | SO_1171 | Q8CX46 | - | 1213530 - 1214168 | 24245.3 |
| dna polymerase iii delta subunit hola | SO_1172 | P28630 | - | 1214181 - 1215212 | 38978.8 |
| om lipoprotein component of lipopolysaccharide assembly complex chaperone lpte | SO_1173 | A1JQ26 | - | 1215265 - 1215759 | 18702.8 |
| leucyl-trna synthetase leus | SO_1174 | Q8EHP4 | - | 1215819 - 1218398 | 96832.1 |
| protein of unknown function duf1451 | SO_1175 | P0AAU1 | + | 1218520 - 1219020 | 18973.2 |
| pild processed protein | SO_1176 | Q72GL2 | - | 1219078 - 1219569 | 18171.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
