Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein of unknown function duf1624 | SO_1157 | Not Available | + | 1201380 - 1202546 | 44427.6 |
| dna-binding ferritin-like protein (oxidative damage protectant) dpsa | SO_1158 | P73321 | - | 1202620 - 1203087 | 17494.9 |
| dna polymerase iii psi subunit hold | SO_1159 | Not Available | + | 1203306 - 1203656 | 13315.0 |
| ribosomal-protein-alanine acetyltransferase rimi | SO_1160 | P0A946 | + | 1203721 - 1204209 | 17811.5 |
| lipoic acid synthetase lipa | SO_1161 | Q8EHQ6 | - | 1204274 - 1205239 | 36466.1 |
| lipoyl(octanoyl) transferase lipb | SO_1162 | Q8EHQ5 | - | 1205236 - 1205889 | 24174.1 |
| protein lipolyation system protein ybed | SO_1163 | Q8EHQ4 | - | 1205982 - 1206248 | 9820.75 |
| d-alanyl-d-alanine carboxypeptidase daca | SO_1164 | P0AEB4 | - | 1206370 - 1207545 | 43242.4 |
| septal ring lipoprotein rlpa | SO_1165 | Q9KTF4 | - | 1207687 - 1208538 | 31352.5 |
| lytic murein transglycosylase b mltb | SO_1166 | P41052 | - | 1208522 - 1209586 | 39716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
