Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na-translocating nadh-quinone reductase subunit e nqre | SO_1107 | Q12QK2 | + | 1150188 - 1150796 | 21530.2 |
| na-translocating nadh-quinone reductase subunit f nqrf | SO_1108 | Q12QK1 | + | 1150843 - 1152099 | 46092.3 |
| fe-s assembly/repair lipoprotein apbe | SO_1109 | A5F5Y3 | + | 1152199 - 1153242 | 38218.1 |
| protein of unknown function duf539 | SO_1110 | P43960 | + | 1153254 - 1153478 | 8238.41 |
| bacterioferritin subunit 2 bfr2 | SO_1111 | P22759 | + | 1153719 - 1154192 | 18386.1 |
| bacterioferritin subunit 1 bfr1 | SO_1112 | P24602 | + | 1154202 - 1154669 | 17975.4 |
| dna polymerase iv dinb | SO_1114 | Q8EHU9 | + | 1157158 - 1158231 | 39615.2 |
| aminoacyl-histidine/glycine-aspartate dipeptidase pepd | SO_1115 | P15288 | - | 1158327 - 1159787 | 52942.7 |
| cytoplasmic leucyl metal-dependent aminopeptidase | SO_1117 | Q27245 | + | 1160006 - 1161559 | 54656.5 |
| uncharacterized protein | SO_1118 | Not Available | + | 1161926 - 1162024 | 3727.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
