Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridylate synthase family protein | SO_1085 | Q8Z1V3 | - | 1124773 - 1125501 | 27020.9 |
| predicted inner membrane protein | SO_1086 | Not Available | - | 1125513 - 1126208 | 25860.5 |
| methionine:proton antiporter mett | SO_1087 | P54571 | - | 1126389 - 1127726 | 46271.5 |
| cytoplasmic apbe family protein | SO_1090 | Not Available | + | 1128548 - 1129387 | 29997.4 |
| 10 tms drug/metabolite efflux pump (dme) family | SO_1091 | P37511 | - | 1129590 - 1130480 | 32182.0 |
| transcriptional regulator arac family | SO_1092 | P76241 | + | 1130671 - 1131450 | 29707.9 |
| issod7 transposase tnpa_issod7 | SO_1093 | P03835 | - | 1131541 - 1132863 | 50228.9 |
| uncharacterized protein | SO_1094 | Not Available | - | 1133432 - 1133818 | 14595.7 |
| o-acetylhomoserine (thiol)-lyase mety | SO_1095 | Q9WZY4 | + | 1134406 - 1135698 | 46000.2 |
| integral membrane protein of unknown function duf2339 | SO_1096 | Not Available | - | 1135785 - 1138922 | 115420.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
