Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-ubiquinone oxidoreductase subunit b nuob | SO_1020 | Q8EI30 | - | 1059197 - 1059871 | 25475.9 |
| nadh-ubiquinone oxidoreductase subunit a nuoa | SO_1021 | Q8EI29 | - | 1059901 - 1060305 | 14898.3 |
| issod1 transposase tnpa_issod1 | SO_1025 | P0CF79 | - | 1062064 - 1063223 | 44945.6 |
| issod4 transposase tnpa_issod4 | SO_1026 | P55620 | + | 1063812 - 1065014 | 45558.8 |
| predicted periplasmic protein | SO_1027 | Not Available | + | 1065149 - 1065493 | 13040.7 |
| uncharacterized protein | SO_1028 | Not Available | + | 1065663 - 1065875 | 7795.71 |
| predicted lipoprotein | SO_1029 | Not Available | + | 1065911 - 1066333 | 15452.5 |
| b12-dependent 5-methyltetrahydrofolate--homocysteine methyltransferase meth | SO_1030 | Q8DCJ7 | - | 1066803 - 1070537 | 137869.0 |
| alpha-ribazole-5-phosphate phosphatase cobc | SO_1031 | P52086 | + | 1070755 - 1071504 | 26935.9 |
| abc-type cobalamin uptake system atpase component btud | SO_1033 | P07821 | + | 1072021 - 1072965 | 34266.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
